Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935644.1_cds_XP_016481430.1_72758
CDS Infomation

[gene=LOC107802432] [db_xref=GeneID:107802432] [protein=mechanosensitive ion channel protein 3, chloroplastic-like isoform X2] [protein_id=XP_016481430.1] [location=join(13838..13915,14042..14101,14963..15126,15497..15620,15718..15815,15905..16018,16231..16291,16815..16964,17175..17285,17491..17658,17759..17872,18594..18650,19323..20144)] [gbkey=CDS]
Sequence

ATGGCGGCTGCTGTCTCATTGCTGCTGCCCCGCGAACTGGGCATCCAGGGGAAATGTGGA
TTCACCTGCCAGCCTAAGGGCACAATGAGCAGGAGCCAGACAGATTCTTGCAGCAAATTT
CTGTCATCACATTCTTCGCGGCAGGACGCGTGGAGCATTTACCTTCTGAATAGTGTACGT
GGGCCTTTGTTTTCCCATCCTCCACCTATTAGATGTAATGTATTGCTCTGCCGCTCCTTA
TTAAAGCCAGGTGGAGGATATGATAGTCAATTTCTGAAAACAGCAGCACTAATATGGAAA
AGGTCATTAAATACTATACATGGGAGCCCCCTTGTGCTTCAGCTGGTTCCGGCCGTTGGA
GTTCTTGTTTTAGCCGCATGGGGTCTCATTCCATTGATGCGCTTTGGCAGAAAATTTTTC
TTTCATGAAAGCGAGAGTAATTGGAAACAAAGCGGCTTGCATTATGTTGCAGATTCCTAT
CTTAAACCTGTGCTTTTATGGACCGGAGCAATACTTATATGCAGAGCAGTGGATCCACTG
ATTTTACCTTCAGCTGCAAGCCAGGCAGTCAAGCAAAGATTTCTTACTTTTATACGATCA
TTATCGACAGTGATGGCACTTGCCTACTGTTTATCTAGCTTGATTCAGCAAACACAAAAA
TTCCTTATGGAGACAAAAGACCCCTCTGATGCAAGAAATATGGGATTCGAATTTGCAGGG
AAAGCTGTATATACTGCAGTGTGGGTTGCATCTGTTTCATTGTTCATGGAACTGCTTGGT
TTTTCTACACAAAAGTGGTTGACAGCTGGGGGTCTTGGGACAGTATTGCTTACTCTTGCT
GGTCGTGAGATACTTACGAACTTCCTCTCAAGCATAATGATCCATGCAACAAGGCCCTTT
GTTCTAAATGACTGGATACAGACAAAGATACAGGGCTATGACGTCTCTGGTACAGTGGAG
CACGTAGGTTGGTGGTCACCAACAGTCATAAGAGGTGATGACCGTGAAGCCATTCATATA
CCAAATCACAAATTTTCAGTGAATATCGTCAGGAATCTTAGCCAGAAGACTCATTGGCGG
ATCAAGACTCACCTTGCCATCAGCCACTTGGATGTGAATAAGATCAATAACATTGTTGCG
GATATGCGGAAGGTTTTGGCGAAAAATCCTCAAATAGAACAGCAGCGATTACATAGGCGA
GTTTTTCTGGATAATGTTGATCCAGAGAATCAGGCTCTTATGATCATGATTTCTTGCTTT
GTGAAGACTTCTTATTTTGAAGAGTACTCCCGAGTGAAGGAGGTTATATTGCTGGATCTG
CTTCGAGTAATCAGCCATCATCGTGCTCGACTTGCTACACCTCTTCGTACTGTGCAGAAA
ACATATCGCGAACCTGATGCGGATGATGTACCATTTGCTGATTCCATTTTCTCTCGTGAT
CGTCCTAATCGCCCATTCTTCCTTATTGAGCCTTCTTATAGGATCAATAATGACGATAAA
ACTAAGGTTTCTGCCGGTTCAGTACAACCTGATGAAGAAAAAGATGGAAAGGCTGAAGCA
CCAAGTACATCACAGGCTGCTGATGATACAAATGGTTTGCCATCAAAGCCTGCTGAGAAA
GAAGTTGTTAAGGTCTCGTCAGCATCAAATGCTAATGTCGATTTAAAAGTAGCAACTTTG
TCTTCAGATGGAAAAACACCAAAACAAGGATCGAGCAGTCCAGTTAAAAGCAACTCTGAG
AAAAACCAAGTTGCTTCAGCAACTGGAGAGCCACCAGGTTTGACATCAGATATCAACATT
GAGAAGACAGATGTGGCAGCTGCTGCTTCACAGGCACAACAAGATGCTGAAAGACCAATT
TCACCACCTTCTGTGGGAAGGCCCATGTTAGAAGATAACATTGTTCTTGGTGTTGCACTA
GAAGGGTCAAAACTAACACTTCCAATTGAGGAAGAAACGACTTCACCCTCTCCCTCTCCA
GCATTTTCCGACTCAGAACCAAAGGAGTTGGCTGCCTGCCGGAATGGGAATAGCTCAACC
AGCTCAAATAAAGATAAGATGGATGATCAGATGGCTGAAGCTCCAAGTGCACCAAATGTC
CAAAAAGAACGAGAAAAGTGA

Peptide Sequence

PEP ID

XP_016481430.1
PEP Infomation

PREDICTED: mechanosensitive ion channel protein 3, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MAAAVSLLLPRELGIQGKCGFTCQPKGTMSRSQTDSCSKFLSSHSSRQDAWSIYLLNSVR
GPLFSHPPPIRCNVLLCRSLLKPGGGYDSQFLKTAALIWKRSLNTIHGSPLVLQLVPAVG
VLVLAAWGLIPLMRFGRKFFFHESESNWKQSGLHYVADSYLKPVLLWTGAILICRAVDPL
ILPSAASQAVKQRFLTFIRSLSTVMALAYCLSSLIQQTQKFLMETKDPSDARNMGFEFAG
KAVYTAVWVASVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREILTNFLSSIMIHATRPF
VLNDWIQTKIQGYDVSGTVEHVGWWSPTVIRGDDREAIHIPNHKFSVNIVRNLSQKTHWR
IKTHLAISHLDVNKINNIVADMRKVLAKNPQIEQQRLHRRVFLDNVDPENQALMIMISCF
VKTSYFEEYSRVKEVILLDLLRVISHHRARLATPLRTVQKTYREPDADDVPFADSIFSRD
RPNRPFFLIEPSYRINNDDKTKVSAGSVQPDEEKDGKAEAPSTSQAADDTNGLPSKPAEK
EVVKVSSASNANVDLKVATLSSDGKTPKQGSSSPVKSNSEKNQVASATGEPPGLTSDINI
EKTDVAAAASQAQQDAERPISPPSVGRPMLEDNIVLGVALEGSKLTLPIEEETTSPSPSP
AFSDSEPKELAACRNGNSSTSSNKDKMDDQMAEAPSAPNVQKEREK

Transcript Sequence

Gene sequence data has not been registered.